BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F10SP1|AL428424
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1719 1523 0.0
>3x_Contig1719
Length = 15804
Score = 1523 bits (748), Expect = 0.0
Identities = 835/888 (94%), Gaps = 2/888 (0%)
Strand = Plus / Plus
Query: 1 gtgcaagagagattcaagatctagtttatttatttatgagtgcmagacagagacagagaa 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 11604 gtgcaagagagattcaagatctagtttatttatttatgagtgcaagacagagacagagaa 11663
Query: 61 cgtgccgcaattggatatcaatctgtaaaamamatgaggggcaagacgatagccgcatac 120
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 11664 cgtgccgcaattggatatcaatctgtaaaaaaaatgaggggcaagacgatagccgcatac 11723
Query: 121 maacaggtgtmcggagaaattaagamaggmagagaccctggtaaaattacycctagaggg 180
||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 11724 aaacaggtgtacggagaaattaagaaaggaagagaccctggtaaaattactcctagaggg 11783
Query: 181 atctcttacyaacatcggaaataccgaaamagaaaaammacttagcgtcgttataacact 240
||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 11784 atctcttactaacatcggaaataccgaaaaagaaaaaaaacttagcgtcgttataacact 11843
Query: 241 aagcctccgtctatmttgtmcaaccmtcgcttgtyctgtmcggctgagamactgcmgtga 300
|||||||||||||| |||| ||||| |||||||| |||| ||||||||| ||||| ||||
Sbjct: 11844 aagcctccgtctatattgtacaaccatcgcttgttctgtacggctgagaaactgcagtga 11903
Query: 301 ctgattgacgaccaataamagtygtctacgccatttctcgatagacaagcgataaamcya 360
|||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | |
Sbjct: 11904 ctgattgacgaccaataaaagttgtctacgcaatttctcgatagacaagcgataaaacta 11963
Query: 361 tcacgtmaatcggmatatagagagacaattcmmgttatcmagacccmcttactctcccgn 420
|||||| |||||| ||||||||||||||||| |||||| |||||| |||||||||| |
Sbjct: 11964 tcacgtaaatcggaatatagagagacaattcaagttatcaagacccacttactctccagt 12023
Query: 421 naatcgntngtgntccttcggngaagcaggaggaacttgcyttgtmgttgcyttmgggct 480
||||| | ||| |||||||| |||| ||||||||||||| |||| ||||| || |||||
Sbjct: 12024 aaatcgatagtgatccttcggagaag-aggaggaacttgctttgtagttgctttagggct 12082
Query: 481 ggmtgggacagagcatacmtcttttaacgggcaaatgataaggttcagcgcgagccacaa 540
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 12083 ggatgggacagagcatacatcttttaacgggcaaatgataaggttcagcgcgagcaacaa 12142
Query: 541 agagtaatagatgccagtttcttgtcaattttcaaccggatgtctagccagngtgtngtn 600
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||
Sbjct: 12143 agagtaatagatgccagtttcttgtcaattttaaaccggatgtctagccagagtgtagta 12202
Query: 601 caggcttgnttatctgtcatacttctgtgagacattccgtgttggttttattgtcggtgc 660
|||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 12203 caggcttgattatctgtaatacttctgtgagaaattccgtgttggttttattgtcggtgc 12262
Query: 661 gctgtgactgtgggtattatgccaacctctgaaagtatagctcctcgttataattggaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12263 gctgtgactgtgggtattatgccaacctctgaaagtatagctcctcgttataattggaaa 12322
Query: 721 aagaaaccttattctgttttactactggaaggaaaaggtgtccgatttaacgcgaggagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12323 aagaaaccttattctgttttactactggaaggaaaaggtgtccgatttaacgcgaggagt 12382
Query: 781 atagtagaacatttgatagaagtttgg-aaacactaatcgcaataccctaggccattaat 839
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 12383 atagtagaacatttgatagaagtttggaaaacactaatcgcaataccctaggccattaat 12442
Query: 840 gttatagaaattcatactgattccgtgcctttttttcagatatttgga 887
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12443 gttatagaaattcatactgattccgtgcctttttttcagatatttgga 12490
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3742
Number of Sequences: 1807
Number of extensions: 3742
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.2 bits)